QUT offers a diverse range of student topics for Honours, Masters and PhD study. Search to find a topic that interests you or propose your own research topic to a prospective QUT supervisor. You may also ask a prospective supervisor to help you identify or refine a research topic.
Found 16 matching student topics
Displaying 13–16 of 16 results
Novel algorithms for microbiome data
Metagenomics data is complex, high-volume data and keeps evolving, requiring novel computational method development as the wetlab approaches changes and databases grow. Thus, novel computational methods are required to take advantage of them.There are several potential projects under this topic, including:using deep learning to improve metagenomics assemblydeveloping better tools to analyse the presence of resistance genes in metagenomics datadeveloping approaches for estimating the quality of genomes from novel generation sequencespredicting the function of small sequences using more than just sequence.Interested …
- Study level
- PhD, Master of Philosophy, Honours
- School
- School of Biomedical Sciences
- Research centre(s)
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Centre for Microbiome Research
Representation learning for anti-microbial resistance
This project is about using neural network models help us understand Anti-Microbial Resistance (AMR), a phenomenon in which bacteria adapt to reduce the effectiveness of antibiotics, usually through a process known as Lateral or Horizontal Gene Transfer - where genes are included in the organism from other sources.Our focus will be on learning compact vector representations of biological sequences known to be associated with AMR genes. By encoding DNA sequences in this way we can more rapidly identify AMR genes …
- Study level
- PhD, Master of Philosophy, Honours
- Faculty
- Faculty of Science
- School
- School of Computer Science
- Research centre(s)
- Centre for Data Science
Investigation of genetic factors that contribute to concussion and its outcomes
The health outcomes from traumatic brain injuries (TBIs) and concussion depend on the nature of the injury, but response also varies greatly between individuals, suggesting that genetic factors may play a role. In particular, due to effects of head trauma on balances of ions, neurotransmitters and energy use in the brain, there is suggestion that variation in the genes that encode proteins involved in these pathways, e.g. ion channels, may affect the risk of, as well as response to a …
- Study level
- PhD, Master of Philosophy, Honours
- Faculty
- Faculty of Health
- School
- School of Biomedical Sciences
Information retrieval and coding methods for large scale bioinformatics
Advances in sequencing technologies over the past two decades have led to an explosion in the availability of genomic sequence data and an increasingly urgent need for scalable clustering and search facilities. One approach is to encode sequences as binary vectors in a high-dimensional space, simplifying the comparison and allowing it to be computed very rapidly using bit-level operations.Coupled with these ideas is the need to provide clustering methods and efficient indexing and lookup in response to search queries. One …
- Study level
- PhD, Master of Philosophy, Honours
- Faculty
- Faculty of Science
- School
- School of Computer Science
- Research centre(s)
- Centre for Data Science
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